Participants

List of participants of the BioHackathon 2019 (who registered only for the symposium day will not be included in this list).
Showing 122 items
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Alshahrani, Mona Knowledge graphs analysis, OntoBert  King Abdullah University of Science and Technology (KAUST), Saudi Arabia  
Antezana, Erick Agrisemantics Norwegian University of Science and Technology, Norway & Bayer CropScience, Belgium LinkedIn 
Aoki, Nobuyuki https://glytoucan.org SparqLite LLC., Japan https://sparqlite.com/contact 
Arai, Yutaro  Slow-Walkers, Inc., Japan  
Araki, Hiromitsu  Kyushu University, Japan  
Asano, Yui PubCaseFinder PENQE, Inc., Japan  
Ashine, Rei  Kyoto University, Japan  
Boland, Miguel d'Arcangues  European Bioinformatics Institute (EMBL-EBI), UK  
Bolleman, Jerven Tjalling UniProt, Rhea SIB Swiss Institute of Bioinformatics, Switzerland LinkedIn 
Bolton, Evan Pubchem National Center for Biotechnology Information (NCBI), USA LinkedIn 
Bono, Hidemasa TogoEx Database Center for Life Science (DBCLS), ROIS, Japan https://orcid.org/0000-0003-4413-0651 
Busby, Ben SNPChips --> Haplotypes --> EMRs  LinkedIn 
Buske, Orion PhenoTips PhenoTips/Gene42, Canada LinkedIn 
Buttigieg, Pier Luigi Semantic approaches to bridge biology and planetary science Alfred Wegener Institute (AWI), Germany https://orcid.org/0000-0002-4366-3088 
Byrd, William E HayaDomain Architecture Matching for protein identification  Hugh Kaul Precision Medicine Institute/Computer Science, University of Alabama at Birmingham, USA http://webyrd.net/ 
Chiba, HIrokazu * Ortholog Ontology Database Center for Life Science (DBCLS), ROIS, Japan   
Crusoe, Michael Robin Common Workflow Language standards Common Workflow Language (CWL) project & ELIXIR-Netherlands https://orcid.org/0000-0002-2961-9670 
Dominguez Del Angel, Victoria Create a Binder appliance on IFB Cloud Institut Français de Bioinformatique (IFB), Elixir-FR (Elixir-France), France LinkedIn 
Dumontier, Michel privacy-preserving distributed machine learning Maastricht University, Netherlands LinkedIn 
Fischer, Jens Christian Variant Graph Visualization University of Tennessee Health Science Center (UTHSC), USA  
Fujino, Takeshi Tiny Cloud Engine (TCE), CWL The University of Tokyo, Japan  
Fujita, Akihiro Glycosmos Soka University, Japan GitHub 
Fujiwara, Toyofumi * PubCaseFinder Database Center for Life Science (DBCLS), ROIS, Japan  
Garcia Castro, Alexander jorunal of research objects BASF, Spain LinkedIn 
Garcia Castro, Leyla Jael Bioschemas validator ZB MED Information Centre for Life Sciences, Germany  
Garrison, Erik A memory efficient genome variation graph server University of California, Santa Cruz (UCSC) , USA http://www.hypervolu.me/~erik/erik_garrison.html 
Goto, Naohisa BioRuby RIMD, Osaka University, Japan LinkedIn 
Goto, Susumu * jPOST Database Center for Life Science (DBCLS), ROIS, Japan LinkedIn 
Hatanaka, Hideki  Database Center for Life Science (DBCLS), ROIS, Japan  
Heumos, Simon Graph Genome Browser Quantitative Biology Center (QBiC), Germany LinkedIn 
Higuchi, Chihiro DruMAP-RDF National Institutes of Biomedical Innovation, Health and Nutrition (NIBIOHN), Japan  
Hirahara, Reika  PENQE, Inc., Japan  
Hoehndorf, Robert DeepGO, Evaluating knowledge graph embeddings King Abdullah University of Science and Technology (KAUST), Saudi Arabia LinkedIn 
Ikeda, Shuya RefEx Database Center for Life Science (DBCLS), ROIS, Japan  
Ingulsrud, Joel  Slow-Walkers, Inc., Japan  
Ishii, Manabu CWL, Nextflow, Galaxy, Workflow RIKEN, Japan LinkedIn 
Jupp, Simon James Borrie Semantics as a Service  European Bioinformatics Institute (EMBL-EBI), UK https://www.ebi.ac.uk/about/people/simon-jupp 
Kalvari, Ioanna Automating the Rfam non-coding RNA annotation pipeline using CWL The European Bioinformatics Institute (EMBL-EBI), UK https://www.ebi.ac.uk/about/people/ioanna-kalvari 
Kamada, Mayumi MGeND/med2RDF Kyoto University, Japan  
Kanegae, Hiromi  National Agriculture and Food Research Organization (NARO), Japan LinkedIn 
Kanitz, Alexander WES-ELIXIR - A language-agnostic workflow execution service for the cloud Swiss Institute of Bioinformatics (SIB) / ELIXIR Switzerland LinkedIn 
Kasahara, Masahiro Tiny Cloud Engine (TCE), Local Package Manager (LPM)  The University of Tokyo, Japan  
Kasukawa, Takeya FANTOM, refTSS RIKEN Center for Integrative Medical Sciences (IMS), Japan LinkedIn 
Katayama, Toshiaki * TogoGenome, BioRuby Database Center for Life Science (DBCLS), ROIS, Japan LinkedIn 
Katsuragi, Tetsuo  National Agriculture and Food Research Organization (NARO), Japan  
Kawamoto, Shoko National BioResource Project(NBRP) National Institute of Genetics(NIG), Japan  
Kawasaki, Ryo  Slow-Walkers, Inc., Japan  
Kawashima, Shuichi * NBDC RDF Portal, TogoGenome Database Center for Life Science (DBCLS), ROIS, Japan LinkedIn 
Kim, Jin-Dong * PubAnnotation, LODQA Database Center for Life Science (DBCLS), ROIS, Japan LinkedIn 
Kimura, Gaku  Japan Software Management Co. Ltd., Japan  
Kobayashi, Norio LOD Surfer, RIKEN Metadatabase  RIKEN, Japan LinkedIn 
Kobayashi, Taizo  Kyushu University, Japan  
Kohara, Yuji * Director Database Center for Life Science (DBCLS), ROIS, Japan  
Kojima, Ryosuke  Kyoto University, Japan  
Kozaki, Kouji LOD Surfer, IOBC, ontology-based data integration Osaka Electro-Communication University (OECU) , Japan LinkedIn 
Kulmanov, Maxat DeepGOPlus King Abdullah University of Science and Technology (KAUST), Saudi Arabia LinkedIn 
Kume, Satoshi Image database, Deep learning for images RIKEN Center for Biosystems Dynamics Research (RIKEN BDR), Japan  https://www.researchgate.net/profile/Satoshi_Kume 
Kushida, Tatsuya NikkajiRDF, IOBC, DruMAP-RDF National Bioscience Database Center (NBDC), Japan Science and Technology Agency (JST), Japan https://orcid.org/0000-0002-0784-4113 
Labra Gayo, Jose Emilio RDFShape-Cytoscape University of Oviedo, Spain http://labra.weso.es/ 
Lee, Sunmyoung  Soka University, Japan  
Liener, Thomas Gherkin inspired RDF validation  LinkedIn 
Magono, Akimichi  Slow-Walkers, Inc., Japan  
Mariethoz, Julien Glycomics@ExPASy Swiss Institute of Bioinformatics (SIB), Switzerland LinkedIn 
Marshall, Mariel Lee  StagePage Canada, Canada LinkedIn 
Masuya, Hiroshi Ontologies for plant phenotype, LOD Surfer, RIKEN MetaDatabase, AgingMiner, PubCaseFinder RIKEN BioResource Research Center, Japan https://info.brc.riken.jp/ 
Minowa, Mari T   Database Center for Life Science (DBCLS), ROIS, Japan  
Mishima, Hiroyuki HeapGestalt Department of Human Genetics, Nagasaki University, Japan  LinkedIn 
Mitsuhashi, Nobutaka TogoVar National Bioscience Database Center (NBDC), Japan Science and Technology Agency (JST), Japan  https://biosciencedbc.jp/about-us/organization/ 
Momma, Norikazu  Hitachi, Ltd., Japan  
Moriya, Yuki * TogoGenome, jPOST Database Center for Life Science (DBCLS), ROIS, Japan  
Mungall, Chris John  Lawrence Berkeley National Laboratory (LBNL) , USA http://berkeleybop.org/people/chris-mungall/ 
Nagano, Akio  PENQE, Inc., Japan  
Naito, Yuki GGGenome, PPPeptide, CRISPRdirect Database Center for Life Science (DBCLS), ROIS, Japan LinkeIn 
Nakazato, Takeru Gendoo, DBCLS SRA Database Center for Life Science (DBCLS), ROIS, Japan LinkedIn 
Ninomiya, Kota  Graduate School of Pharmaceutical Sciences, The University of Tokyo, Japan  
Nishida, Kozo Dash Bio RIKEN, Japan  
Nishiyama, Keiichiro  Osaka Electro Comunication University, Japan  
Ogishima, Soichi HPO Japanese ToMMo, Tohoku University, Japan https://www.megabank.tohoku.ac.jp/english/about/member/department05/#ogishima 
Ohta, Tazro * Pitagora Galaxy, ChIP-Atlas Database Center for Life Science (DBCLS), ROIS, Japan LinkedIn 
Oishi, Naoya TogoEx, Gendoo, AOE, DBCLS SRA dogrun Inc., Japan  
Okabeppu, Yoko  OKBP Inc., Japan  
Oki, Shinya * ChIP-Atlas Kyushu University, Japan https://orcid.org/0000-0002-4767-3259 
Okuda, Shujiro jPOST, Glycosmos Niigata University, Japan  
Ono, Hiromasa RefEx Database Center for Life Science (DBCLS), ROIS, Japan LinkedIn 
Osana, Yasunori Portable FPGA acceleration framework University of the Ryukyus, Japan   
Prins, Pjotr Variant Graph for GWA University of Tennessee Health Science Center (UTHSC), USA http://thebird.nl/ 
Queralt Rosinach, Núria Graph-based Drug Repositioning Scripps Research (SR), USA LinkedIn 
Sakuma, Keiko *  Database Center for Life Science (DBCLS), ROIS, Japan  
Satoh, Daisuke TogoVar Lifematics Inc., Japan  
Schmidt, Ralf  Department for Bioinformatics University of Basel, Switzerland LinkedIn 
Seaman, Josiah David Graph Genome Browser Royal Botanic Gardens Kew, UK LinkedIn 
Shin, Jaemoon PubCaseFinder Database Center for Life Science (DBCLS), ROIS, Japan  
Shinkai, Norio  RIKEN  
Shinmachi, Daisuke GlyCosmos SparqLite LLC., Japan LinkedIn 
Shiota, Masaaki GlyCosmos Soka University, Japan  
Sirén, Jouni GBWTGraph University of California Santa Cruz (UCSC), USA https://iki.fi/jouni.siren/ 
Stevens, Garrett J JBrowse 2 University of California Berkeley (UC Berkeley), USA LinkedIn 
Suetake, Hirotaka SAPPORO, tonkaz The University of Tokyo, Japan GitHub 
Tago, Shin-ichiro med2rdf Fujitsu Laboratories Ltd., Japan  
Takagi, Toshihisa * Director  National Bioscience Database Center (NBDC), Japan Science and Technology Agency (JST), Japan   
Takami, Tomoyo jPOST Kyushu University, Japan  
Takatsuki, Terue *  Database Center for Life Science (DBCLS), ROIS, Japan LinkedIn 
Takeo, Nario  Slow-Walkers, Inc., Japan  
Tanaka, Satoshi Mass++, jPOST Trans-IT, Japan  
Tanaka, Yoshihisa med2rdf, link prediction Kyoto University, Japan  
Tanjo, Tomoya CWL, Pitagora Galaxy National Institute of Informatics (NII), Japan https://orcid.org/0000-0002-4421-9659 
Tateisi, Yuka  National Bioscience Database Center (NBDC), Japan Science and Technology Agency (JST), Japan  
Toyo-oka, Licht TogoVar National Bioscience Database Center (NBDC), Japan Science and Technology Agency (JST), Japan LinkedIn 
Tsuchiya, Shinichiro Glycosmos Graduate School of Engineering, Soka University, Japan  
Unni, Deepak Raveendran BioLink Model Lawrence Berkeley National Laboratory (LBNL) , USA LinkedIn 
Watanabe, Yu jPOST, GlyCosmos Niigata University, Japan  
Weiland, Claus GCN4bio, FLOPO Senckenberg Biodiversity and Climate Research Centre (SBIK-F), Germany https://www.researchgate.net/profile/Claus_Weiland 
Wu, Chunlei BioThings API, Schema Playground Scripps Research, USA LinkedIn 
Yamada, Issaku Glycoinformatics, WURCS The Noguchi Institute, Japan LinkedIn 
Yamada, Ryota  fuku inc (fuku), Japan https://twitter.com/roy29fuku 
Yamaguchi, Atsuko * SPARQL Builder Database Center for Life Science (DBCLS), ROIS, Japan LinkedIn 
Yamamoto, Yasunori * Umaka Suite, Allie, Colil Database Center for Life Science (DBCLS), ROIS, Japan LinkedIn 
Yamanaka, Ryota G2GML, Med2RDF Oracle Corporation LinkedIn 
Yatsuzuka, Shigeru  National Bioscience Database Center (NBDC), Japan Science and Technology Agency (JST), Japan  
Yokoi, Kakeru  The National Agriculture and Food Research Organization (NARO), Japan  
Yokoyama, Toshiyuki * Graph Genomes The University of Tokyo, Japan  
Yoshizawa, Akiyasu C jPOST, PPPeptide, Mass++ Graduate School of Pharmaceutical Sciences, Kyoto University (Kyoto U.), Japan  
Showing 122 items
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